HIV Dynamics and Replication Program

NCI HIV DRP Published Next Gen Sequences

DRP
ID
Pubmed
ID
Title Author Journal Year Sequence
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1 31487271 Linked dual-class HIV resistance mutations are associated with treatment failure Boltz, VF et al. JCI Insight 2019 link
2 31776247 Combined Near Full-Length HIV-1 Sequencing and Integration Site Analysis Informs Intra-Patient Viral Dynamics and Reconstruction of Replication-Competent Viral Ancestors Patro, S, et al. PNAS 2019 link
3 32151239 An analytical pipeline for identifying and mapping the integration sites of HIV and other retroviruses Wells, DW, et al. BMC Genomics 2020 link
4 33016926 HIV-1 Viremia Not Suppressible by Antiretroviral Therapy Can Originate from Large T-Cell Clones Producing Infectious Virus Halvas, EK, et al. JCI 2020 link
5 39727416 HIV-1 Transcription Start Sites Usage and Its Impact on Unspliced RNA Functions in People Living with HIV Saiful Islam, et al. mBio 2025 link
6 40331822 How to recover from a bad start: adaptation of HIV-1 transcription start site mutants during serial passaging in culture Olga Nikolaitchik, et al. Journal of Virology 2025 link
7 NA HIV-1 Excludes Non-guanosine Nucleotides in Major Transcription Start Sites to Ensure Distinct Unspliced RNA Fates Jonathan P. Kitzrow, et al.  Journal of Virology 2026 link

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